omiXcore

The algorithm has been calibrated on RBP interactomes studied by eCLIP assays (Van Nostrand et al. 2016) and allows high-throughput predictions on long intergenic non-coding RNAs.

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Protein sequence (FASTA format - length in the range 150-2500 aa)

Run against lincRNAs database or custom RNA sequences


RNA sequences (FASTA format - length in the range 500-20000 nt)


Just trying out? Use the following examples:

a positive protein-RNA pair, validated by eCLIP assay.