CROSSalign

Computes the similarity of RNA secondary structure

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Modes of Dynamic Time Warping (DTW; see the Tutorial/Documentation for the details)


Organism (all lincRNAs from Ensembl 93, Jul 2018) recent release







Organism (all lincRNAs from Ensembl 84, Mar 2016) testing set







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RNA Sequence 1 (FASTA format, please ensure that your sequences only contain A, C, G, T, and U. Do not use !@#$% etc.; the minimum required sequence length is 25 nucleotides.)

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RNA Sequence 2 or for custom dataset (FASTA format, please ensure that your sequences only contain A, C, G, T, and U. Do not use !@#$% etc.; the minimum required sequence length is 25 nucleotides.)


Just trying out? Use the following examples: