catRAPID omics v2.1 [protein(s) VS transcriptome]

Interaction prediction module between protein(s) and the precompiled transcriptome of a model organism

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Which part of the transcriptome would you like to interrogate?


Which library would you like to analyze?










Which library would you like to analyze?





Upload File

Upload a fasta file with your protein sequence(s) (FASTA format, maximum 10 sequences of at least 50 aa)


Just trying out? Use the following examples:

6 Human RBPs (FXR1, FXR2, FMR1, PTBP1, MBNL2, RBM15) against the Human circular transcriptome

EZH2 protein (full-length) against the Human transcriptome [Zhao et al., 2010]

TADBP protein (nucleic-acid-binding domains) against the Human small non-coding transcriptome